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http://scinets.org/item/rib158i
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http://biolod.org/database/rib158i/RIKEN_SciNetS_SciNeS?lang=en
http://scinets.org/item/rib158i?lang=en
URL (Japanese)
http://biolod.org/database/rib158i/RIKEN_SciNetS_SciNeS?lang=ja
http://scinets.org/item/rib158i?lang=ja
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SciNetS ID :
rib158i
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SciNetS is presented by
RIKEN BASE (Bioinformatics And Systems Engineering Division)
Website
News
Contents
RIKEN SciNetS/SciNeS
SciNetS
Medical care & Drug discovery
Registries
Researcher registry
Researcher
Database Registry
DatabaseRegistry
Mammalian ingetrated database
Home
The RIKEN integrated database of mammals
Plant integrated database
Home
The integrated database of plant omics data
Integrated Database of Protein Experiments and Structures
Structural Data
Protein Data Bank
RIKEN Protein Database
Integrated Database of Protein Experiments and Structures
Experimental data using protein
Bacpedia (Riken Harima SPring8-Center)
SSBC (Systems and Structural Biology Center)
RIKEN Harima Heavy-atom Database [Data]
Protein Name Database
Swiss-Prot
RefSeq Human
RefSeq Mouse
Protein Domain Database
InterPro
Pfam
SMART
Experimental Material [ontology]
Integrated Database of Protein Experiments and Structures
Experimental Method [ontology]
Integrated Database of Protein Experiments and Structures
Semantic Application Programming Interface
Semantic-JSON: a lightweight application program interface for accessing the Semantic Web
SciNeS open specifications
BioSPARQL: Ontology-based smart building of SPARQL queries for biological Linked Open Data
BioLOD.org
SemanticTable.org Home
SemanticTable
GenoCon
GenoCon (International Rational-Genome-Design Contest)
GenoCon
Publications
Portal
Researcher
RIKEN cooperation
RIKEN tech. assist working group
RIKEN Portal
Biodata repository
Download files storage
PDF files
PDF File Repository
animation
animation repository
RIKEN press release
RIKEN Press Releases
System support
Programming Interfaces
SciNeS open specifications
Consultation Service
RIKEN Consultation Service Project
Resources
Upper ontology
ARTADE2 predicted gene model database
Protein Data Bank
HanaDB-At/OS (Arabidopsis thaliana/Oryza sativa)
Taxonomy
Europhenome phenotype experiment database
RIKEN Ortholog
RIKEN Plant gene family
RIKEN RAFL cDNA
Plant Phosphoproteome Database
Researcher
FOX Hunting
Bacpedia (Riken Harima SPring8-Center)
SSBC (Systems and Structural Biology Center)
Swiss-Prot
Qualiy and Quantity
RIKEN Cassava Full-Length cDNA Database
RIKEN Arabidopsis Activation tagging line
Mouse Body part (test)
Mouse Ensembl Gene
PATO
RIKEN Harima Heavy-atom Database [Data]
FANTOM4
RIKEN Mouse Phenotype database
CHEBI Chemical entities of biological interest
RIKEN ENU Mouse Lines
BRC Mouse Resource
RIKEN RARGE Alternative Splicing
PO class structure (Plant structure)
Mammalian Ortholog
Genome Sequence
Entrez Mouse
Rat Ensembl Gene
The RIKEN integrated database of mammals
Genetics Ontology Lite
Entrez Human
HUGO Gene Nomenclature Committee
Human Ensembl Gene
Rat Genome Database
The integrated database of plant omics data
RefSeq Human
RefSeq Mouse
Cerebellar Development Transcriptome Database
RIKEN Phenome Integration of Arabidopsis mutants
PO class structure (Plant growth and developmental stage)
MGI Strains and Polymorphisms
Dog Ensembl Gene
Institute (Japan)
FANTOM eeDB
Experimental analysis
RIKEN disease model mice
RIKEN Protein Database
Integrated Database of Protein Experiments and Structures
Chimpanzee Ensembl Gene
Experimental supplies
Mouse Clinic protocol
FIX (Physico-chemical methods and properties)
Plant Trait Ontology
Mouse Phenoyping experiment template
Plant Environment Ontology
Phenotyping Experiment Template
RIKEN RARGE Promoter
Populus trichocarpa (JGI v1.1)
Sorghum bicolor gene
Integrated Mouse Phenotype Database
Vitis vinifera gene
Mouse Resource DB Cooperation
RSGI
RIKEN PSC Tilling Array
Selaginella moellendorffii gene
Specialized ontology
Mammalian Phenotype [Ontology]
eVOC [Ontology]
Adult Mouse Anatomical Dictionary [Ontology]
Mouse Pathology [Ontology]
Cell Type [Ontology]
Amphibian Gross Anatomy [Ontology]
RIKEN Hub Database
BioResource
Taxonomy Ranks
Taxonomy
Discussion
Change to JAPANESE
Contents of RIKEN SciNetS/SciNeS
Page(s)
1
1 - 12 of 12
SciNetS
Last update:
2012-03-12
Medical care & Drug discovery
Last update:
2010-08-23
Registries
Last update:
2012-05-08
Mammalian ingetrated database
Last update:
2011-02-14
Plant integrated database
Last update:
2011-02-14
Integrated Database of Protein Experi...
Last update:
2011-02-14
Semantic Application Programming Inte...
Last update:
2012-01-31
BioLOD.org
Last update:
2012-01-14
GenoCon
Last update:
2012-01-01
Publications
Last update:
2012-05-08
System support
Last update:
2010-08-24
Resources
Last update:
2010-08-18
Page(s)
1
1 - 12 of 12
Weekly Access Rank for All Databases
Top50
2012-03-16 to 2012-03-22
Weekly Ranking
Database Name
Trend
Organization
1
Researcher
unch.
BASE
2
DatabaseRegistry
up
BASE
3
Taxonomy
unch.
NCBI
4
RIKEN SciNetS/SciNeS
down
BASE
5
RIKEN Organization
unch.
6
ARTADE2 predicted gene model database
up
BASE
7
FOX Hunting
up
BASE
,
PSC
8
Protein Data Bank
up
RCSB
9
PDF File Repository
down
BASE
10
HUGO Gene Nomenclature Committee
up
HUGO
11
CHEBI Chemical entities of biological interest
up
OBO
12
InterPro
up
EBI
13
A.thaliana locus
up
TAIR
14
GenoCon
up
BASE
15
BRC Mouse Resource
down
BRC
16
mammalian phenotype ontology
down
OBO
17
Mouse Anatomy Ontology
up
OBO
18
The RIKEN integrated database of mammals
down
BASE
,
BRC
19
Literature repository
down
20
Bacpedia (Riken Harima SPring8-Center)
down
RSC
21
The integrated database of plant omics data
up
PSC
,
BASE
22
The Rice Gene From RAP-DB
up
RAP
23
MGI Alleles
down
MGI
24
OMIM
up
NCBI
25
Protein Modification (MOD)
up
26
Gene Ontology
up
GO
27
RIKEN disease model mice
up
BRC
28
HP Human phenotype ontology
down
OBO
29
RIKEN Press Releases
down
RIKEN
30
Mouse MGI Gene
down
MGI
31
RIKEN BRC Cell bank
down
32
A.thaliana cDNA
up
PSC
,
BASE
33
Scientific Journals
down
NCBI
34
Basic Formal Ontology 1.1.1
down
35
FMA Foundational Model of Anatomy(subset)
up
OBO
36
RIKEN BRC
down
BRC
37
Genome Sequence
unch.
38
TIGR(The International Rice Genome)/MSU(Michigan State University)
up
TIGR
39
RIKEN Ortholog
up
PSC
40
Swiss-Prot
down
EBI
41
Entrez Human
up
NCBI
42
Plant Phosphoproteome Database
up
BASE
,
PSC
43
HanaDB-At/OS (Arabidopsis thaliana/Oryza sativa)
down
PSC
44
Institute (Japan)
up
45
Qualiy and Quantity
up
BRC
46
RefSeq Human
up
NCBI
47
RIKEN Harima Heavy-atom Database [Data]
down
RSC
48
Pfam
up
Sanger Institute
49
UO Units of measurement
up
OBO
50
RIKEN Phenome Integration of Arabidopsis mutants
up
BASE